| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,901,595 | 0 | C | G | 62.5% | 100.4 / 142.4 | 120 | G482G (GGG→GGC) | recB | exonuclease V (RecBCD complex), beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (45/0); new base G (75/0); total (120/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 121 total aligned reads displayed.
CCATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTCGCGAAACATGAACGCGTCATCAGTC > minE/1901528‑1901652 | ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTccc > 1:2288625/1‑70 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:1766043/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:624492/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:611977/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:568180/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:3059839/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:770620/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:1493210/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:773874/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:483421/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:386342/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:3086091/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:1216673/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:1205793/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:2164488/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:2212497/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:3133551/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:1054021/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCg > 1:2264689/1‑71 (MQ=255)ccATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGACTTTTCCCg > 1:3210906/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGa > 1:1994370/1‑47 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGa > 1:255439/1‑47 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGa > 1:1723038/1‑47 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGa > 1:867162/1‑47 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTAttt > 1:2657565/1‑70 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTAttt > 1:2791764/1‑70 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:2975130/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:2538746/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:2659567/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:1075603/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:1330003/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:2436985/1‑71 (MQ=255) gtTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:2137145/1‑71 (MQ=255) gtTTCACATTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTAttt > 1:1057727/1‑70 (MQ=255) tttCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTcg > 1:1041938/1‑71 (MQ=255) tttCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTcg > 1:3076548/1‑71 (MQ=255) tttCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTc > 1:2408551/1‑70 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGGACGCGTCATCAGTc > 1:1814648/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGt > 1:2672116/1‑70 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2935748/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2950145/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:3108289/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2998294/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2934310/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2519207/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:641706/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:961602/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:955678/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:93477/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:831120/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:805321/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:709967/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:676561/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:663287/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:316850/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:574723/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:556129/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:496942/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:429955/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:3237284/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:3235677/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:3208311/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1590449/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1993919/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1882213/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1873522/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1826499/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1818474/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1710464/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1707321/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1656889/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1641963/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:204382/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1542115/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1388430/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1347456/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1329430/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1285164/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1219705/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1193037/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:1016640/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2062919/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2797618/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2787920/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2651548/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2632883/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:101086/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2444015/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2410649/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2387899/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2225044/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2191351/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:216443/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2122144/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2086390/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2063658/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:2870708/1‑71 (MQ=255) aCGCCTGATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCCTCATCAGt > 1:2195654/1‑70 (MQ=255) aCGCCTCATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:419518/1‑71 (MQ=255) aCGCCTAATTTTTGCCGGCAGATTTCACAGGAATAAACGGTATTTCACGAAACATGAACGCGTCATCAGTc > 1:417378/1‑71 (MQ=255) | CCATCAGCCACATTTTCATCGCAGGCTGTGTTTCACCTTTAAATACAAAACGTAACGCCTGATTTTTCCCGGCTGATTTCACTGGAATAAACGGTATTTCGCGAAACATGAACGCGTCATCAGTC > minE/1901528‑1901652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |