Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2661948	2661967	20	2 [1]	[1] 2	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

GATCGCTGCCAAACGGGTAAAAGGTTTTCTCTTCAATGGCTTTCAGCAGCATTGCCTGTTCGTCTGCGCCCAGTT  >  minE/2661877‑2661951                                                                       |     gATCGCTGCCAAACGGGTAAAAGGTTTTCTCTTCAATGGCTTTCAGCAGCATTGCCTGTTCGTCTGCGccc      <  1:178847/71‑1 (MQ=255)                                ttCAATGGCTTTCAGCAGCATTGCCTGTTCGTCTGCGCCCAGtt  <  1:110285/44‑1 (MQ=255)                                                                       |     GATCGCTGCCAAACGGGTAAAAGGTTTTCTCTTCAATGGCTTTCAGCAGCATTGCCTGTTCGTCTGCGCCCAGTT  >  minE/2661877‑2661951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑