Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | minE | 1,935,566 | A→T | intergenic (‑16/+75) | prfB ← / ← recJ | peptide chain release factor RF‑2/ssDNA exonuclease, 5' ‑‑> 3'‑specific |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | minE | 1,935,566 | 0 | A | T | 100.0% | 10.8 / NA | 5 | intergenic (‑16/+75) | prfB/recJ | peptide chain release factor RF‑2/ssDNA exonuclease, 5' ‑‑> 3'‑specific |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (4/1); total (4/1) |
ATGCGATTATTTACCGGATTAATTTCAAACATGGTCTGATTTCTTTTATTGAGCTAGTCAAAATGCGGTGATAAGAGCGGGATTG > minE/1935519‑1935603 | aTGCGATTATTTACCGGATTAATTTCAAACATGGTCTGATTTCTTTTTTTGAGCTAGTCAAAATGCGGTGa < 1:202800/71‑1 (MQ=255) gTCTGATTTCTTTTTTTGAGCTAGTCAAAATGCGGTGATAAGAGCGGGAt > 1:168287/1‑50 (MQ=255) tCTTTTTTTGAGCTAGTCAAAATGCGGTGATAAGAGCGGGATTg > 1:138326/1‑44 (MQ=255) tCTTTTTTTGAGCTAGTCAAAATGCGGTGATAAGAGCGGGATTg > 1:167854/1‑44 (MQ=255) tCTTTTTTTGAGCTAGTCAAAATGCGGTGATAAGAGCGGGATTg > 1:171693/1‑44 (MQ=255) | ATGCGATTATTTACCGGATTAATTTCAAACATGGTCTGATTTCTTTTATTGAGCTAGTCAAAATGCGGTGATAAGAGCGGGATTG > minE/1935519‑1935603 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |