| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1937758 | 100 (1.180) | 6 (0.080) | 4/112 | 5.9 | 6.5% | coding (333/711 nt) | dsbC | protein disulfide isomerase II |
| ? | minE | = 1937765 | 83 (1.100) | coding (326/711 nt) | dsbC | protein disulfide isomerase II | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1937687‑1937758‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacacgTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA < minE/1937765‑1937696 CCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACA < 1:529093/70‑1 CCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG > 1:1445798/1‑71 CCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG < 1:2688457/71‑1 tGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTG < 1:399022/69‑1 TTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACA < 1:2187476/48‑1 TGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG > 1:1809859/1‑48 TGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAA < 1:3067140/43‑1 CATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTG < 1:1625939/55‑1 ATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGTTT < 1:3461302/57‑1 TTTGTGGCAGTAACCACAGGTAATATCAGTAAACA < 1:1990877/35‑1 TTTGTGGCAGTAACCACAGGTAATATCAGTAAACA < 1:1538766/35‑1 CAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGT < 1:16315/42‑1 CAGTAACCACAGGTAATATCAGTAAACACGTCATCACCGTGT < 1:2303572/42‑1 TAAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGG < 1:470432/68‑1 tAACACGTCATCACCGTGTTTACTGATATTACCTGTGGT < 1:3173930/38‑1 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:2980169/1‑71 AAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:3949642/1‑71 AACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAA > 1:2052380/1‑63 ACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGA > 1:889888/1‑69 ACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACT > 1:2615738/1‑51 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTA > 1:4077856/1‑71 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAA > 1:419886/1‑61 CACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAA > 1:1365437/1‑61 ACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGA > 1:890665/1‑55 CGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACA < 1:1901330/71‑1 GTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA > 1:4051783/1‑71 GTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAA < 1:2963959/57‑1 CCCAGCGCGTTGTAGTCTGCCATTTGCTCATGCAGTTTGTGGCAGTAACCACAGGTAATATCAGTAAACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1937687‑1937758‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacacgTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAA < minE/1937765‑1937696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |