| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1999387 | 68 (0.800) | 5 (0.080) | 3/96 | 5.8 | 8.7% | intergenic (‑256/+36) | pitB/gss | phosphate transporter/fused glutathionylspermidine amidase and glutathionylspermidine synthetase |
| ? | minE | = 1999392 | 54 (0.840) | intergenic (‑261/+31) | pitB/gss | phosphate transporter/fused glutathionylspermidine amidase and glutathionylspermidine synthetase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1999305‑1999387‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgtactgattatGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTCATTTCA < minE/1999392‑1999324 TGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCC > 1:2682933/1‑71 GTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCG > 1:2497195/1‑71 ATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACT < 1:532089/71‑1 TATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGA < 1:1458144/70‑1 TCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAT > 1:2919484/1‑71 TCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGA > 1:124749/1‑67 AAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACT < 1:66851/56‑1 GGAATATATAAATATTGAATATTTTGATTAATCCCCG < 1:578121/37‑1 AAATATTGAATATTTTGATTAATCCCCGTACTGATTATGAAGAATAAT > 1:3236656/1‑48 AAATATTGAATATTTTGATTAATCCCCGTACTGATTATGAAGAATAAT < 1:280057/48‑1 AATATTTTGATTAATCCCCGTACTGATTATGAAGAATAATC < 1:3724802/41‑1 AATATTTTGATTAATCCCCGTACTGATTATGAAGAATAATC < 1:1885890/41‑1 AATATTTTGATTAATCCCCGTACTGATTATGAAGAATAATC < 1:715774/41‑1 CCCGTACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATAT < 1:2637908/71‑1 CCCGTACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATAT < 1:1138289/71‑1 CCCGTACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATAT < 1:3484357/71‑1 CCGTACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATAT > 1:2804123/1‑70 CGTACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTAATATATTCCAATATTT < 1:1926951/71‑1 TACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTAT > 1:2721004/1‑71 ACTGATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTAT < 1:1138749/54‑1 GATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTC < 1:3635236/69‑1 ATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTCAT < 1:147760/70‑1 ATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATAT < 1:3076583/54‑1 ATTATGAAGAATAATCAGTACGGGGATTAATCAAAATATT > 1:4120896/1‑40 TTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTCA < 1:4003597/68‑1 TTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTCA < 1:2696094/68‑1 TTATGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTC < 1:3980633/67‑1 TATGAAGAATAATCAGTACGGGGATTAATCAAAATA > 1:2844338/1‑36 TGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTCATTTCA < 1:3575854/70‑1 TGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1999305‑1999387‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccgtactgattatGAAGAATAATCAGTACGGGGATTAATCAAAATATTCAATATTTATATATTCCAATATTTATTCATTTCA < minE/1999392‑1999324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |