| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2845280 = | 79 (0.930) | 5 (0.070) | 4/114 | 5.9 | 6.2% | coding (976/978 nt) | poxA | predicted lysyl‑tRNA synthetase |
| ? | minE | 2845304 = | 80 (1.040) | intergenic (+22/‑197) | poxA/yjeM | predicted lysyl‑tRNA synthetase/predicted transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAATGAAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2845355‑2845280‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaattaACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCACA > minE/2845304‑2845371 AAAATGAAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAG < 1:3802459/71‑1 ATGAAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAAT < 1:3995662/71‑1 TGAAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATT < 1:1339899/71‑1 AAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA < 1:662250/70‑1 AAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA < 1:403629/70‑1 AAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA < 1:3938107/70‑1 CTTATCAAGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA < 1:721149/47‑1 TTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAAT < 1:1683055/44‑1 TCACGCCATTCTTCGCTTTTAATTCAGTAATTTTTCAGAA > 1:1572549/1‑40 TCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAA > 1:2367795/1‑40 ACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAA > 1:1416152/1‑38 ACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAA > 1:2110222/1‑38 CCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA > 1:3444660/1‑38 TTAATTCAGTAATTTTTCAGAATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATAT < 1:3021001/66‑1 TTAATTCAGTAATTTTTCAGAATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATAT < 1:3025849/66‑1 ATTCAGTAATTTTTCAGAATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCAT > 1:3174094/1‑71 TTCAGTAATTTTTCAGAATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCT > 1:1255165/1‑53 TCAGTAATTTTTCAGAATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATT > 1:21005/1‑70 AATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGGCA > 1:2306194/1‑71 AATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCA > 1:4013556/1‑71 AATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCG < 1:3049113/61‑1 AATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTT > 1:3449273/1‑58 ATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCAC < 1:3418048/71‑1 ATTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCAC < 1:1152259/71‑1 TTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCACA < 1:1118631/71‑1 TTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCAC > 1:2768711/1‑70 TTAACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTT < 1:1850209/54‑1 AAAATGAAAACATATGCTACAGAATGGCGCTTATCACGCCATTCTTCGCTGTTAATTCAGTAATTTTTCAGAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/2845355‑2845280‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaattaACAGCGAAGAATGGCGTGATAAGCGCCATTCTGTAGCATATGTTTTCATTTTTCCGTTAAAGGCCACA > minE/2845304‑2845371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |