Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 373860 374018 159 78 [0] [4] 34 fepE regulator of length of O‑antigen component of lipopolysaccharide chains

AAAACCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACA  >  minE/373790‑373859
                                                                     |
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:369078/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:67491/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:602444/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:587890/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:5772/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:515373/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:50518/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:480188/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:41417/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:685958/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:359151/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:351404/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:34003/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:324569/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:318636/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1006539/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:222884/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:193253/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:826223/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:969539/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:941515/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:938754/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:901898/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:894242/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:852475/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:835265/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:830929/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:22496/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:810263/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:753247/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:739977/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:731806/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:72528/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:707903/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:687956/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1169680/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:134915/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1329325/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1323939/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:178320/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1239095/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1223495/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1206932/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1203172/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1314135/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1163416/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1162943/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1128694/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1102903/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:108746/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1024473/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1022599/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:101986/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1363118/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1554704/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1518563/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1459436/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1443085/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1441399/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1428216/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1422817/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1422203/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1353590/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1406555/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1398639/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1365072/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1376682/70‑1 (MQ=255)
aaaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1387910/70‑1 (MQ=255)
aaaaCCCAGTTCGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:474937/70‑1 (MQ=255)
 aaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:763583/69‑1 (MQ=255)
 aaaCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:189905/69‑1 (MQ=255)
   aCCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:848453/67‑1 (MQ=255)
     ccAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1159348/65‑1 (MQ=255)
        gTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:1119029/62‑1 (MQ=255)
           tgaaaatgaaaaACTGGCTCAGGTTCGAATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:968901/59‑1 (MQ=255)
               aaagaaaaaCTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:789071/55‑1 (MQ=255)
                           gCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:788943/43‑1 (MQ=255)
                                 gATCGCATTAAAACGAAAAATCAACTTGATGCAAACa  <  1:865362/37‑1 (MQ=255)
                                                                     |
AAAACCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACA  >  minE/373790‑373859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: