Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1442112	1442769	658	17 [0]	[0] 12	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

CGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATG  >  minE/1442073‑1442111                                       | cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:298367/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:952389/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:900169/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:861586/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:643222/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:604274/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:524422/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:509316/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:355312/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:1187163/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:289990/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:186099/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:15191/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:14734/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:1452078/39‑1 (MQ=255) cggTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:1197925/39‑1 (MQ=255)  tgTCAATAACGAATTGCGCATTTTACGGGCAATCAATg  <  1:1280485/37‑1 (MQ=255)                                       | CGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATG  >  minE/1442073‑1442111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑