Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1444889	1444949	61	98 [0]	[0] 109	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

ATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGCCC  >  minE/1444819‑1444888                                                                      | atCAATATGATTCTTGCTTAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1209323/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTACGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:320903/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGCCGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1338561/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGCCGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:490223/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGCCGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:790974/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:573149/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:589896/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:571989/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:565589/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:555411/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:553259/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:542699/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:525589/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:522506/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:507855/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:499538/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:477010/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:441178/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:435989/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:405661/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:40357/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:365300/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:352932/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:340417/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:29328/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:267632/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:821118/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:989704/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:982649/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:975511/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:962274/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:92006/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:910086/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:903160/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:881156/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:860221/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:843759/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:835283/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:574243/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:773857/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:754127/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:727603/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:723148/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:68095/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:670205/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:663947/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:633920/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:604008/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:597103/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1026013/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:119276/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1305630/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1268235/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1250715/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1241778/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1237293/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1227731/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1210600/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1200421/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1198370/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1197375/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:119521/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:23410/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1170251/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1160129/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1159333/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1151215/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:114405/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1131400/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1123848/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1111228/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1054657/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:104657/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1000313/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1315098/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:263544/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:165647/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1539971/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:153541/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1535282/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1519055/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1509319/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1505106/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1497084/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1495733/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1482424/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1466261/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1459158/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1451790/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1406158/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1396909/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1385367/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1365814/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1353477/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1323104/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1318839/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:1313769/1‑70 (MQ=255) atCAATATGATTCTTGCTAAGTACAATAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGccc  >  1:991/1‑70 (MQ=255)                                                                      | ATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTGATAGCCC  >  minE/1444819‑1444888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑