Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2380071	2380110	40	65 [0]	[0] 100	rmuC	predicted recombination limiting protein

AAACCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATTGCCTGCC  >  minE/2380001‑2380070                                                                      | aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACTTTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:494180/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCTGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1542619/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:750125/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:772745/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:679883/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:665711/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:647161/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:639155/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:601146/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:592457/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:523931/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:455011/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:452406/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:425292/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:406378/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:38424/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:312746/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:184572/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:798467/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:799704/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:817847/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:824869/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:828056/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:849820/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:870666/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:872723/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:881139/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:882818/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:915770/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:943830/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:966295/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:995412/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:998729/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1304610/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1054940/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1060119/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1074562/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1086677/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1087101/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1088328/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:112812/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1158747/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1159792/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1160328/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1230771/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1235937/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1257248/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1286021/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1296675/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:208679/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1309959/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1323720/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1375884/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1376931/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1402680/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1406783/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1416355/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1446557/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1484652/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:150392/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1505739/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:158462/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:181725/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATtgcctgcc  >  1:1032541/1‑70 (MQ=255) aaaCCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAACAGAGTTTTTTCATtgcctgcc  >  1:1507541/1‑70 (MQ=255)                                                                      | AAACCGCGAAACGCTTCTGCCTGCGCCAGCACATTTCCGCGCCCTGAAGAGAGTTTTTTCATTGCCTGCC  >  minE/2380001‑2380070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑