Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 2661411 2661436 26 173 [0] [0] 8 rtcR sigma 54‑dependent transcriptional regulator of rtcBA expression

Only 100 of 173 total aligned reads displayed.

CGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGT  >  minE/2661340‑2661410
                                                                      |
cGTCAAAACGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1237539/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCGGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:931130/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:441795/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:580495/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:566204/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:536524/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:521025/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:515873/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:507404/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:490637/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:49/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:474205/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:450665/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:443735/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:596841/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:429343/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:413002/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:410969/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:390167/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:368047/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:339617/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:325900/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:320850/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:295566/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:293840/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1004835/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:799145/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:98803/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:970608/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:951456/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:948525/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:91588/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:883827/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:867951/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:860052/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:839008/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:817850/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:817447/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:591507/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:775883/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:765805/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:731402/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:725046/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:713058/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:688703/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:683541/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:679970/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:67236/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:652723/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:274946/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1148034/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:25875/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1362077/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1357217/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1351718/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1327172/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1281352/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1276990/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1274667/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1249167/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1210322/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1208564/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1180767/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1378215/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1128035/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1124429/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1107979/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1089218/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1088013/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1081416/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:107007/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1059339/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1051961/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:101916/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1013866/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1390187/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:254122/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:236710/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:223798/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:195839/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:177028/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:17323/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:165616/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:154987/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1531701/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1505208/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1499346/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1487362/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1450710/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1409239/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1394976/71‑1 (MQ=255)
cGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1394461/71‑1 (MQ=255)
     aaaaGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCGTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:168184/66‑1 (MQ=255)
     aaaaGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1513006/66‑1 (MQ=255)
       taGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:349004/63‑1 (MQ=255)
            ggCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1438443/59‑1 (MQ=255)
                  cGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:772830/53‑1 (MQ=255)
                     cTGCGGAAAGCGACTTTGACTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:1380600/50‑1 (MQ=255)
                       gCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:157825/48‑1 (MQ=255)
                            aaGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGt  <  1:145684/43‑1 (MQ=255)
                                                                      |
CGTCAAAAAGCTGGCGTCCGGCTGCGGAAAGCGACTTTGCCTGGCGGCAGATAGCGATAACGTGTTCCAGT  >  minE/2661340‑2661410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑