Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2667958	2668232	275	97 [0]	[0] 70	[malT]	[malT]

CCCGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACG  >  minE/2667887‑2667957                                                                       | cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAGAGTTTAGCCAGCAGGCTCTCACg  <  1:200446/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:334583/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:513110/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:510990/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:507862/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:443313/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:435582/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:417752/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:411644/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:399750/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:381526/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:346203/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:338978/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:522106/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:324824/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:319425/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:317938/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:297648/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:279888/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1035148/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:263491/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:246983/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:239479/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:607340/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:999527/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:949684/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:943051/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:940102/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:812802/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:75820/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:756525/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:725936/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:672900/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:626722/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:266968/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:592105/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:58213/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:578005/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:576210/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:575572/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:573866/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:566173/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:553868/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:546714/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:522813/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1381180/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1267983/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1272924/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1267525/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1240288/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1197414/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1295653/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1313183/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1341199/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1344056/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1350808/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1179753/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1357339/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1117492/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1389110/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1487546/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:209582/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:181577/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1529470/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1044588/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1497641/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1393347/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1097773/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1414340/71‑1 (MQ=255) cccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCACTCACg  <  1:1511390/71‑1 (MQ=255) cccGCAGGACTCGTGAGCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1068552/71‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:118816/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1076597/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:843255/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1178029/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:116950/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:994773/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1035635/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:483095/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:195099/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1522198/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1519388/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1491315/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1484485/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1431341/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:376936/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1369034/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1272028/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1357252/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:509045/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1289176/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1280933/70‑1 (MQ=255)  ccGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:574600/70‑1 (MQ=255)     cAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:1079550/67‑1 (MQ=255)     cAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:55483/67‑1 (MQ=255)           tCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:679239/61‑1 (MQ=255)                            cGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACg  <  1:500630/44‑1 (MQ=255)                                                                       | CCCGCAGGACTCGTGATCAGCGCCAGCCGGAAGTTGTTCGCGCCGGAAAGTTTAGCCAGCAGGCGCTCACG  >  minE/2667887‑2667957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑