Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2711232	2711282	51	61 [0]	[0] 119	nirC	nitrite transporter

TTAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTG  >  minE/2711161‑2711231                                                                       | ttAAGGCGATACCAAAGGTCGTGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1023889/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACTAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:385720/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:56172/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:367517/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:368195/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:384889/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:420108/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:439267/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:447201/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:456217/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:463935/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:47793/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:48401/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:512821/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:533586/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:534036/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:299521/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:572469/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:617210/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:627484/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:629256/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:7122/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:772203/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:797253/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:867606/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:88893/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:890232/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:97003/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:981839/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:992514/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:998888/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:268741/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1086467/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1091582/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1106628/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1133387/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1172707/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1238914/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1265494/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1280679/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1293229/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1297706/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1308897/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1312587/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1317682/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1365339/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1375186/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:142875/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1454920/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1459862/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1476621/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:147670/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1489786/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1508855/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:197323/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:221867/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:229133/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:261281/71‑1 (MQ=255) ttAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:342246/71‑1 (MQ=255)                  gTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTg  <  1:1263795/54‑1 (MQ=255)                                 aaaGGGCGTACGGATGGATCGAGCAAATTTCCGAGCGTg  <  1:1046736/39‑1 (MQ=255)                                                                       | TTAAGGCGATACCAAAGGTCGCGCCCATCACCAAAGGGCGTACGGATGGATCGAGCAAATTACCGAGCGTG  >  minE/2711161‑2711231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑