Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2953709	2954689	981	32 [0]	[0] 17	[rsmC]–[rimI]	[rsmC],holD,[rimI]

TGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCAA  >  minE/2953673‑2953708                                    | tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:349541/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:996852/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:978381/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:908612/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:902142/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:902002/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:890195/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:875878/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:841786/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:806044/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:708815/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:656724/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:544293/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:533939/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:498057/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:102980/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:291673/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:26148/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:178142/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1529595/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1435036/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1386083/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1355259/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1345235/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1339000/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1302742/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1168990/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1097346/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1084642/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1061343/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCaa  >  1:1044387/1‑36 (MQ=255) tGTCCCCACTGGCAGCAGAGAAAGTAAAATCATCaa  >  1:493641/1‑36 (MQ=255)                                    | TGTCCCCACTGGCAGCAGAGAAAGTAAATTCATCAA  >  minE/2953673‑2953708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑