Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1722812	1723346	535	28 [0]	[0] 69	yfhK	predicted sensory kinase in two‑component system

ATTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTT  >  minE/1723347‑1723417 |                                                                       aTTGGCACTGGCAAAGGCTTCAAGCCGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACt        >  1:1555274/1‑65 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCg                           >  1:1093025/1‑46 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGGCCGCTGTTGTTACACTGAAGtt  >  1:473590/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTa            >  1:925708/1‑61 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:369242/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:542845/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:463365/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:456273/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:444919/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:412401/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:376615/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:575051/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:358602/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:332205/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:319487/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:268010/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:255218/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1041557/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:572529/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:246630/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:592138/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:614558/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:667609/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:703065/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:759387/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:817084/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:838250/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:853104/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:906455/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:920796/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:932651/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:964038/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:96603/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:985205/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1247773/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1345755/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1342070/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1338058/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1332108/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1313069/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1294092/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1293429/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1263492/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1368950/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1223677/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1216469/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:12162/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1194130/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1191561/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1097848/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1060938/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1381155/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:237973/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:234517/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:225805/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:215217/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:195937/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:187645/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1514016/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1495543/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:14867/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1439115/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:1409617/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGtt  >  1:244737/1‑71 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGt   >  1:434550/1‑70 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGt   >  1:1552715/1‑70 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGt   >  1:283057/1‑70 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGt   >  1:485155/1‑70 (MQ=255) aTTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTCAAGtt  >  1:917994/1‑71 (MQ=255) |                                                                       ATTGGCACTGGCAAAGGCTTCAAGACGTGCGGCGGCGGCAGCATCGGGACCGCTGTTGTTACACTGAAGTT  >  minE/1723347‑1723417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑