Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 1885082 1885333 252 121 [1] [0] 68 barA hybrid sensory histidine kinase, in two‑component regulatory system with UvrY

CGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAGC  >  minE/1885334‑1885404
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cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGtt                                     >  1:1071216/1‑36 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGt                                      >  1:30154/1‑35 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAg                              >  1:1110059/1‑43 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAgcgcgc           >  1:1128867/1‑62 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGcc          >  1:591663/1‑63 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:336434/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:33297/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:318166/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:337604/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:340674/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:307677/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:342438/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:41572/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:454266/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:486513/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:494260/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:527088/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:573165/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:611914/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:591502/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:218200/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:620987/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:637733/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:668524/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:678566/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:68649/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:729183/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:73227/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:780726/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:782577/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:809916/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:854780/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:951173/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:981824/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1325233/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1020582/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:103004/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1043824/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1047605/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1055799/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:11231/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1127934/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1144319/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1163224/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1238682/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1260417/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1267552/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1292769/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1321262/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1345009/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1389560/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:217148/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:182377/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1549872/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1534265/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1513918/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1466976/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1464782/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1452184/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1432741/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1415946/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:1406805/1‑71 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAg   >  1:1502729/1‑70 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAg   >  1:625288/1‑70 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAg   >  1:159840/1‑70 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAg   >  1:954139/1‑70 (MQ=255)
cGTGAAACGCTGGAGCAGATGGAAATTAAGAACGTTGAGTTAGATCTGGCGAAAAAgcgcg            >  1:1003153/1‑61 (MQ=255)
cGTGAAAAGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAgc  >  1:263788/1‑71 (MQ=255)
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CGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAGC  >  minE/1885334‑1885404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: