Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2141252	2141406	155	106 [0]	[0] 84	nusA	transcription termination/antitermination L factor

CTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAATTCTTC  >  minE/2141407‑2141476 |                                                                      cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:426824/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:518285/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:507245/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:503765/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:488220/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:488123/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:477161/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:473797/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:45424/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:453012/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:44/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:534661/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:394401/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:364932/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:357848/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:290223/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:277349/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:268147/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:256679/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:253154/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1006136/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:67520/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:996200/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:981562/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:964958/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:953409/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:944349/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:934818/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:91064/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:759688/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:681796/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:247110/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:635669/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:626774/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:608733/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:603966/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:589473/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:582148/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:562/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:553332/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:551517/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:122592/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1335976/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1332917/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1291682/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1280598/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1263829/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1261094/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1257694/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1254628/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1252029/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1248222/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1337252/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1162774/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1161276/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1160465/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1156363/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1093452/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1084453/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1078430/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:105540/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1050811/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1039129/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:148698/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:224354/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:218843/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:21493/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:212724/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:189656/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1529910/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1521928/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1518422/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1497940/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:246820/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1476005/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1462646/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1438557/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1386533/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1382170/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1380252/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:1376312/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAAttcttc  <  1:137563/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCAAAttcttc  <  1:482607/70‑1 (MQ=255) cTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCGCTTTCATCGGCACATCGGCCAAttcttc  <  1:371783/70‑1 (MQ=255) |                                                                      CTTCAACGGTCGGCTCATCAAGGCCTTCGATTTCCAACAGCTCTTTCATCGGCACATAGGCCAATTCTTC  >  minE/2141407‑2141476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑