Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2258394	2258441	48	37 [0]	[0] 69	rpoB	RNA polymerase, beta subunit

GTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAT  >  minE/2258442‑2258499 |                                                          gTTTTTCTTCTGGGGTCAGCTGAGTTTCTCCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:892110/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAAGCAGAAt  <  1:202935/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:532140/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:650886/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:622702/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:593564/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:575494/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:558733/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:552996/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:535740/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:653846/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:526869/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:519607/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:470253/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:464639/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:44749/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:41142/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:386572/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:813993/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:975868/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:94588/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:922157/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:917700/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:913221/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:849112/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:846533/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:821911/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:653670/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:79731/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:79467/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:789476/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:781877/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:756491/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:720272/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:364048/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1224645/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1359178/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1334654/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1323910/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1301757/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1294453/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1286557/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1238767/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1236366/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1373171/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:11983/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1194691/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1157497/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1138702/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1113294/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1072760/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1013712/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1527784/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:331703/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:324014/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:316501/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:274708/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:225185/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:20462/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:204362/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:167756/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1002144/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1525385/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1479759/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1466777/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1411355/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1398712/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:1386575/58‑1 (MQ=255) gTTTTTCTTCTGGGGTCAGCAGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAt  <  1:606618/58‑1 (MQ=255) |                                                          GTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTCGGCGTTACCTTACCAACCAGAAT  >  minE/2258442‑2258499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑