Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2496827	2497095	269	111 [0]	[0] 35	emrD/ivbL	multidrug efflux system protein/ilvB operon leader peptide

ACTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCA  >  minE/2497096‑2497166 |                                                                       aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACATAACGTGATCAACCCCTCa  <  1:944052/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:50630/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:45818/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:542009/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:554747/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:560571/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:59407/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:629233/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:663071/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:687995/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:723361/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:743841/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:745400/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:784877/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:827295/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:834310/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:880777/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:885909/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1422181/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1018958/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1086595/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1114838/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:11156/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1143669/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1253661/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1337621/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1339565/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:1000236/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:24253/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:25311/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:278523/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:316399/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:331843/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:358950/71‑1 (MQ=255) aCTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCa  <  1:426171/71‑1 (MQ=255) |                                                                       ACTGACGAAACCTCGCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCA  >  minE/2497096‑2497166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑