Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2661508	2661588	81	8 [0]	[0] 64	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

CGCGAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGGTG  >  minE/2661589‑2661659 |                                                                       cgcgAAAGTTCCCGCGCCATGTTGCCTGGGGAGAGGTCGCaa                               >  1:1451672/1‑42 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCaa                               >  1:316712/1‑42 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGcc                          >  1:1086617/1‑47 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCACCCAGGCGCGCCGCGCTTCGgtg  >  1:1170083/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGcgcgccgcgc         >  1:278835/1‑64 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGcgcgccgc           >  1:823552/1‑62 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCtt       >  1:244682/1‑66 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCt        >  1:818153/1‑65 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:198639/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:933198/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:218847/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:244566/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:281146/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:30008/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:343971/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:385339/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:388718/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:441369/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:515712/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:554721/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:605724/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:632484/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:721607/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:778455/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:824560/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:855934/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:88352/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1015914/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1357872/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1234273/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1234792/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1257038/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1293103/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:181068/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1194031/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1305216/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:135128/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1189444/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1184611/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1386333/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1155348/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1392036/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1412568/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1449832/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1464206/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:1507066/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:160485/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgtg  >  1:111380/1‑71 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:483310/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:881011/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:1115850/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:1195917/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:76311/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:758684/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:613929/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:611862/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:1238732/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:472007/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:1355590/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:325846/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:311051/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:260623/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:239346/1‑70 (MQ=255) cgcgAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGgt   >  1:174844/1‑70 (MQ=255) |                                                                       CGCGAAAGTTACCGCGCCATGTTGCCTGGGGAGAGGTCGCAAAAGCCAACCAGGCGCGCCGCGCTTCGGTG  >  minE/2661589‑2661659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑