Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 248811 248927 117 73 [0] [2] 87 brnQ predicted branched chain amino acid transporter

TTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCT  >  minE/248871‑248998
                                                         |                                                                      
ttCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACg                                                           >  1:1523893/1‑71 (MQ=255)
ttCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACg                                                           >  1:1535886/1‑71 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:584162/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:626828/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:575194/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:553162/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:544637/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:540835/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:540315/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:516070/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:505923/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:504597/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:49648/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:484092/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:479589/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:463527/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:453591/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:45328/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:429955/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:398059/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:377545/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:31932/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:765316/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:998925/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:997920/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:918392/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:903736/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:897488/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:877713/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:848605/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:790031/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:789239/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:772486/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:259615/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:744841/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:739777/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:724051/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:720794/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:714866/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:704747/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:682865/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:659254/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:658049/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:644785/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1172605/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1303494/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:130178/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1284003/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1255043/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1234461/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1221728/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1212348/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1209467/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1204216/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1192469/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1305082/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1163312/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1160960/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1118554/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1116112/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1109151/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1069015/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1063756/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1015444/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1015211/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1540587/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1001743/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:233750/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:220589/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:197651/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:176287/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:168680/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:160408/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:158448/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:270248/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1533718/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1510241/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1473965/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1459075/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1442682/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1380205/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1375042/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1323960/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1322966/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGctctct  <  1:1316675/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTCTGCCCAGTACGTACCGctctct  <  1:1553538/71‑1 (MQ=255)
                                                         cctgcctgGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATACTTTGCCCAGTACGTACCGctctct  <  1:951054/71‑1 (MQ=255)
                                                         |                                                                      
TTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCT  >  minE/248871‑248998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: