| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 1,869,135 | T→G | T207T (ACA→ACC) | ygcW ← | predicted deoxygluconate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,869,135 | 0 | T | G | 88.1% | 668.5 / 53.0 | 210 | T207T (ACA→ACC) | ygcW | predicted deoxygluconate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (25/0); new base G (185/0); total (210/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 224 total aligned reads displayed.
GAGTATCGCCCCAACGGTTTGCCGGAATATGATCAAGAACGCGCTGATTGGTTTCTGGATTACTGCGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGACC > minE/1869068‑1869203 | gAGTATTACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:684067/1‑71 (MQ=255)gAGTATGACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:200979/1‑71 (MQ=255)gAGTATCACGCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1077183/1‑71 (MQ=255)gAGTATCACCCCAACTGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:696730/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:1380844/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:1412910/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:1311590/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:607519/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:673943/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:711990/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:223938/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:1066161/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACgggt > 1:16503/1‑70 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:38640/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:567599/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:468103/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:450760/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:43589/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:23501/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:396608/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:393477/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:255759/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:281171/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:37200/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:361546/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:286375/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:352176/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:325936/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:289501/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:319431/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:697640/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1003289/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:955641/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:922081/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:908309/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:881396/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:867601/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:827549/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:783604/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:760715/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:706066/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:493094/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:678707/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:67804/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:632339/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:581957/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:568768/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:973919/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:542823/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:527593/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:506403/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1146360/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1324772/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:233618/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:129578/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1279014/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1275645/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1237790/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1214599/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1203511/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1186640/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:115551/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:132059/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1130168/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1114049/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1104488/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1095869/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1073230/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1061054/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1047208/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1043234/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1030189/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1024621/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1493530/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:209832/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:192168/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:186543/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:182811/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:172969/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1555558/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1536627/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1501391/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1329786/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1489036/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1473262/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1466416/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1443542/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1426896/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1402172/1‑71 (MQ=255)gAGTATCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:1359834/1‑71 (MQ=255)gAGTACCACCCCAACGGTTTGCCGGAATATGATCAAGAACACGCTGGTTAGTTTCTGGATTACTACGGGTc > 1:897164/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACGTGAATATTATATTGAcc > 1:1429744/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:1450928/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:732647/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:330343/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:1227500/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:419004/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:884684/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGAcc > 1:239849/1‑71 (MQ=255) cGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCACTTACCTGAATATTATATTGAcc > 1:1182862/1‑71 (MQ=255) | GAGTATCGCCCCAACGGTTTGCCGGAATATGATCAAGAACGCGCTGATTGGTTTCTGGATTACTGCGTGTCGCCAGCGTAATATCTGTTGCATAATAGCCAGGGGCGATACCATTTACCTGAATATTATATTGACC > minE/1869068‑1869203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |