| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 2,058,137 | C→A | R18R (CGC→CGA) | ttdB → | L‑tartrate dehydratase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 2,058,137 | 0 | C | A | 97.9% | 167.9 / ‑3.0 | 48 | R18R (CGC→CGA) | ttdB | L‑tartrate dehydratase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (47/0); total (48/0) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
CCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGT > minE/2058104‑2058191 | cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCgg > 1:267120/1‑39 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGc > 1:1281272/1‑40 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGAtg > 1:661470/1‑44 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACg > 1:1510871/1‑64 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTg > 1:353923/1‑70 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTg > 1:402633/1‑70 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:613454/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1505326/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1535781/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:245939/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:960439/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:269845/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:316176/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:40808/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:825145/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:639688/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:960022/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:6695/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:940814/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:68356/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:732757/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:734742/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:767039/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:794148/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1304269/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1053291/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1134487/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1180583/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1181070/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1239823/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1247121/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1251078/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1252296/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1280722/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1281295/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1291653/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:105138/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1306443/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1357702/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1362165/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1377493/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1392184/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1406968/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1440797/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1455204/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1467009/1‑71 (MQ=255)cccGATCAAAGCTGAAGATCTGCAAGATATTCGAGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGa > 1:1503440/1‑71 (MQ=255) tCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGt > 1:1532287/1‑70 (MQ=255) | CCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGT > minE/2058104‑2058191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |