Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | minE | 2,269,829 | G→T | Q168K (CAG→AAG) | murB ← | UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | minE | 2,269,829 | 0 | G | T | 98.2% | 199.0 / ‑3.6 | 56 | Q168K (CAG→AAG) | murB | UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (55/0); total (56/0) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
AGCGAAGCGGTCCTGGTATTCATGTTTAAAAATACTGTCGCGATAGC > minE/2269815‑2269861 | ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTcgcg > 1:11620/2‑42 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGAt > 1:394363/2‑44 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAg > 1:693763/2‑46 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:467956/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1016442/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:203082/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:22249/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:28541/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:299101/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:32123/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:352433/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:36992/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:373436/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:442395/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:448235/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:448326/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:166368/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:611028/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:616694/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:66709/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:708480/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:744062/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:75511/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:790319/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:807958/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:809834/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:924419/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:981421/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1557823/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:103582/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1037318/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1052516/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:107247/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1119485/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:112277/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1134654/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1141212/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1164945/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1201144/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1207010/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1252285/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1283738/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1365121/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1399340/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1436724/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1454794/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:14911/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:151669/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1525274/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1526084/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1527870/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1545540/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:1559488/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTTAAAAAATACTGTCGCGATAGc > 1:481786/2‑47 (MQ=255) ggCGAAGCGATCCTTGTATTCATGTGTAAAAATACTGTCGCGATAGc > 1:1068699/2‑47 (MQ=255) ggCGAAGCGATCCTGGTATTCATGTTTAAAAATACTGTCGCGATAGc > 1:818533/2‑47 (MQ=255) | AGCGAAGCGGTCCTGGTATTCATGTTTAAAAATACTGTCGCGATAGC > minE/2269815‑2269861 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |