| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 1,269,468 | (A)7→8 | intergenic (‑18/‑282) | uvrC ← / → yedP | excinuclease UvrABC, endonuclease subunit/conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,269,461 | 1 | . | A | 100.0% | 24.8 / NA | 10 | intergenic (‑11/‑289) | uvrC/yedP | excinuclease UvrABC, endonuclease subunit/conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (6/4); total (6/4) | |||||||||||
GTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑AAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAT > minE/1269394‑1269525 | gTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aa > 1:471602/1‑70 (MQ=255)gTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aa < 1:1595932/70‑1 (MQ=255) tAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaa > 1:1824599/1‑70 (MQ=255) aGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaaaaa < 1:1578832/71‑1 (MQ=255) aGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaaaaa < 1:1749945/71‑1 (MQ=255) aGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaaaaa < 1:458076/71‑1 (MQ=255) cGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaa < 1:2224065/64‑1 (MQ=255) cgccgcATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAATAAAAAAAATCCCGa < 1:2446938/71‑1 (MQ=255) cATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaaaaaa > 1:2447359/1‑59 (MQ=255) cATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaaaaaa > 1:2450867/1‑59 (MQ=255) cATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑aaaaaaaa > 1:347017/1‑59 (MQ=255) gcgcgAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAATAAAAAAAATCCCGACCCt < 1:17340/61‑1 (MQ=255) gTTTCAGATAACGCGCCCTATCGCCGGAATGCACAATAAAAAAAATCCCGa > 1:2215531/1‑51 (MQ=255) tttCAGATAACGCGCCCTATCGCCGGAATGCACAATAAAAAAAATCCCGa < 1:373980/50‑1 (MQ=255) ttCAGATAACGCGCCCTATCGCCGGAATGCACAATAAAAAAAATCCCGACCCTGAGGGGGTCGGGATGaaa > 1:727875/1‑71 (MQ=255) cccTATCGCCGGAATGCACAATAAAAAAAATCCCGACCCTg < 1:1429311/41‑1 (MQ=38) tCGCCGGAATGCACAATAAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGc > 1:1065017/1‑64 (MQ=255) aTGCACAATAAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTaaa > 1:2347/1‑70 (MQ=255) tGCACAATAAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTaaaa > 1:2228556/1‑70 (MQ=255) cacaATAAAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAt > 1:888346/1‑71 (MQ=255) | GTTAAGGCCGTCGCCGCATTGGTGCGCGCGAGTTTCAGATAACGCGCCCTATCGCCGGAATGCACAAT‑AAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAAT > minE/1269394‑1269525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |