| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 637630 = | 42 (0.670) | 5 (0.090) | 3/110 | 5.6 | 11.7% | intergenic (+145/‑116) | mukB/ycbB | fused chromosome partitioning proteins/predicted carboxypeptidase |
| ? | minE | 637652 = | 38 (0.690) | intergenic (+167/‑94) | mukB/ycbB | fused chromosome partitioning proteins/predicted carboxypeptidase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTATTTTACGACTTGCCTGTACAACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/637703‑637630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcttGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATTCA > minE/637652‑637718 TTATTTTACGACTTGCCTGTACAACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCA < 1:763986/69‑1 ATTTTACGACTTGCCTGTACAACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGC < 1:1936455/70‑1 TTTTACGACTTGCCTGTACAACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGCT > 1:296710/1‑70 AACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGCTT < 1:2238650/52‑1 AACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGCTT < 1:687721/52‑1 AACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGCTT < 1:597138/52‑1 CAAGCCTGTTACTCATCAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCG < 1:1745234/67‑1 AAGCCTGTTACTCATCAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTAC < 1:137232/56‑1 AGCCTGTTACTCATCAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTG > 1:1461616/1‑52 AGCCTGTTACTCATCAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTG > 1:1920605/1‑52 AGCCTGTTACTCATCAGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTG > 1:385173/1‑52 AGGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATT < 1:857627/71‑1 GGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATA < 1:2680004/56‑1 GGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCG < 1:679676/49‑1 GGCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCG < 1:1952321/49‑1 GCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATTCA < 1:2956841/71‑1 GCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATT < 1:560279/69‑1 GCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATT > 1:2696091/1‑69 GCTTGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATT > 1:2292906/1‑69 TTATTTTACGACTTGCCTGTACAACGCCAATACTCACGAAAGTATGACGAGCAAGCCTGTTACTCATCAGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/637703‑637630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcttGCTCGTCATACTTTCGTGAGTATTGGCGTTGTACAGGCAAGTCGTAAAATAACAGCCTGGCTATTCA > minE/637652‑637718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |