| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1133128 | 66 (1.060) | 3 (0.050) | 3/110 | 5.6 | 4.9% | coding (647/759 nt) | ydiY | conserved hypothetical protein |
| ? | minE | = 1133138 | 58 (1.050) | coding (637/759 nt) | ydiY | conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1133052‑1133128‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatgttGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTCCAGAGT < minE/1133138‑1133072 GTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAA < 1:1121539/71‑1 TGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT > 1:2934257/1‑70 TGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT > 1:2821936/1‑70 TGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT > 1:1453824/1‑70 TGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT < 1:2070585/70‑1 TGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAA < 1:813991/58‑1 GCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT < 1:2950608/61‑1 CAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCAAAAATGTT < 1:2291962/60‑1 ACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTGCTATTAATGAAC > 1:486141/1‑70 CTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAA > 1:1633810/1‑52 CTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAA > 1:1154704/1‑52 TCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAA > 1:589668/1‑49 TGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTGCTATTAATGAACATT < 1:2778697/69‑1 TGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAA > 1:2443344/1‑47 TGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAA > 1:5948/1‑47 GAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT > 1:1495690/1‑51 AGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTGCTATTAATGAAC < 1:1852931/57‑1 AGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAA < 1:1875227/40‑1 TCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAA < 1:1426220/35‑1 AAATGTTGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTC > 1:798086/1‑68 AAATGTTGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATG > 1:1933136/1‑54 ATGTTGCTATTAATGAACATTTTGGACTGAAGGTGGCTTAC < 1:1472786/41‑1 TGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTCCAGAGT > 1:1434742/1‑68 GTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1133052‑1133128‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaatgttGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTCCAGAGT < minE/1133138‑1133072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |