| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1514740 = | 54 (0.870) | 6 (0.110) | 3/110 | 5.6 | 11.1% | coding (751/1518 nt) | purF | amidophosphoribosyltransferase |
| ? | minE | 1514760 = | 48 (0.870) | coding (731/1518 nt) | purF | amidophosphoribosyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCGCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1514816‑1514740‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagcaCATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCACGCAGGA > minE/1514760‑1514829 CGCGCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGG > 1:2095428/1‑71 GCGCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGT < 1:1591914/71‑1 GCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGT < 1:1176114/69‑1 GGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAGC > 1:555767/1‑70 GGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAGCA > 1:864386/1‑70 AAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTC < 1:1706153/62‑1 AAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTC < 1:1065458/62‑1 GCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTC > 1:287855/1‑37 AGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAG < 1:2906062/37‑1 AATGTGCTGACAATCCGGTCAGCACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCG < 1:234935/67‑1 AATGTGCTGACAATCCGGTCAGCACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCG < 1:1875446/67‑1 AATGTGCTGACAATCCGGTCAGCACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCG < 1:1753566/67‑1 AATGTGCTGACAATCCGGTCAGCACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCG < 1:1685843/67‑1 GCTGACAATCCGGTCAGCACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCG > 1:2017138/1‑71 CTGACAATCCGGTCAGCACATTGACGGGTAAACAACTGCCCT < 1:3044031/42‑1 AGCACATTGACGGGTAAACAACTGCCCTTCTTCAGT < 1:1799891/36‑1 GCACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCACGCAG > 1:2771377/1‑71 CACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCACGCAG > 1:2792492/1‑70 CACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCC < 1:1789255/52‑1 ACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCCCGCAGG > 1:607909/1‑70 ACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCACGCAGGA < 1:2588627/71‑1 ACATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCACGCAGG > 1:910322/1‑70 CGCGCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1514816‑1514740‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagcaCATTGACGGGTAAACAACTGCCCTTCTTCAGTGATGTAAATCGCTTCGCCCGGCGCGACGTCACGCAGGA > minE/1514760‑1514829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |