| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | minE | 1,097,909 | T→C | intergenic (+32/‑397) | ydiK → / → ydiL | predicted inner membrane protein/conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,097,909 | 0 | T | C | 100.0% | 94.8 / NA | 28 | intergenic (+32/‑397) | ydiK/ydiL | predicted inner membrane protein/conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (16/12); total (16/12) | |||||||||||
GGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGG > minE/1097851‑1097975 | ggCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCt < 1:1710447/70‑1 (MQ=255) aaTCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTa > 1:2125572/1‑66 (MQ=255) aTCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGa > 1:1181350/1‑70 (MQ=255) gaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATttg > 1:1756079/1‑71 (MQ=255) gAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATttgcttgc > 1:1646449/1‑70 (MQ=255) aTAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGctct > 1:1732254/1‑71 (MQ=255) gTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTaa < 1:2283590/39‑1 (MQ=255) tAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGctct < 1:285064/66‑1 (MQ=255) tcatcaGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGctct < 1:3035700/59‑1 (MQ=255) atcaGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTcc > 1:1524076/1‑71 (MQ=255) aGGCGGCTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTc < 1:1414068/67‑1 (MQ=255) ggcTCTGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTAc > 1:1957823/1‑71 (MQ=255) ctctGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTccc < 1:2872788/52‑1 (MQ=255) tctGCCGCCTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTAc > 1:2917813/1‑68 (MQ=255) ccgccTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAtt > 1:2576015/1‑71 (MQ=255) ccgccTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAt > 1:2058740/1‑70 (MQ=255) cgccTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCatat < 1:975090/51‑1 (MQ=255) cgccTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAtt > 1:1854341/1‑70 (MQ=255) ccTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAttt > 1:2512181/1‑51 (MQ=255) ccTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAg < 1:1302568/71‑1 (MQ=255) cTGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAg > 1:747574/1‑70 (MQ=255) tGATTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCt > 1:550927/1‑56 (MQ=255) aTTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCatat < 1:2367041/45‑1 (MQ=255) aTTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCatat < 1:1807856/45‑1 (MQ=255) aTTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCatat < 1:1233391/45‑1 (MQ=255) aTTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAttt > 1:1274532/1‑47 (MQ=255) aTTGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTgg > 1:116086/1‑71 (MQ=255) ttGCTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTgg < 1:712062/70‑1 (MQ=255) | GGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGG > minE/1097851‑1097975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |