Predicted mutation
evidence seq id position mutation annotation gene description
RA minE 1,777,713 T→C N105D (AAT→GAT)  trmD ← tRNA (guanine‑1‑)‑methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE1,777,7130TC100.0% 220.2 / NA 62N105D (AAT→GAT) trmDtRNA (guanine‑1‑)‑methyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (37/25);  total (37/25)

ATTTCGGTTTGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATAAATCACCTT  >  minE/1777646‑1777779
                                                                   |                                                                  
aTTTCGGTTTGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGt                                                                 >  1:793792/1‑71 (MQ=255)
       tttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGt                                                          >  1:1185642/1‑71 (MQ=255)
        ttGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGtt                                                         >  1:2455612/1‑71 (MQ=255)
         tGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCg                                                                  >  1:2916470/1‑61 (MQ=255)
         tGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTc                                                        >  1:2460129/1‑71 (MQ=255)
             tCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGtt                                                                <  1:798080/59‑1 (MQ=255)
               aCGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGc                                                              >  1:266432/1‑59 (MQ=255)
               aCGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGAc                                                  >  1:695141/1‑71 (MQ=255)
                cgcgCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGcc                                                             >  1:2387533/1‑59 (MQ=255)
                cgcgCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGa                                                   >  1:2215477/1‑69 (MQ=255)
                  cgcTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCg                                                                  <  1:2888104/52‑1 (MQ=255)
                   gcTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGccc                                              >  1:997588/1‑71 (MQ=255)
                    cTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCt                                                     >  1:801986/1‑63 (MQ=255)
                    cTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCt                                                     >  1:195782/1‑63 (MQ=255)
                    cTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCg                                             <  1:420670/71‑1 (MQ=255)
                    cTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCg                                             >  1:242172/1‑71 (MQ=255)
                    cTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCg                                             <  1:1047668/71‑1 (MQ=255)
                     tCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTAGATCCg                                                                  <  1:401/49‑1 (MQ=255)
                      cATCTATACCTTCGTAGCGACAGCACACCAGAATCAATTTTTGATCAGTTGc                                                              <  1:952333/52‑1 (MQ=38)
                       aTCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGc                                            <  1:783916/69‑1 (MQ=255)
                        tCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACg                                                 <  1:1905326/63‑1 (MQ=255)
                            taCCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTg                                         <  1:1156812/67‑1 (MQ=255)
                            taCCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATc                                      <  1:2192217/70‑1 (MQ=255)
                            taCCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATc                                      <  1:2159572/70‑1 (MQ=255)
                            taCCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATc                                      <  1:1120825/70‑1 (MQ=255)
                              ccTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAg                                   >  1:217284/1‑71 (MQ=255)
                              ccTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAg                                   >  1:1574151/1‑71 (MQ=255)
                               cTTCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCAGCTTGATCAAGc                                  >  1:2018442/1‑71 (MQ=255)
                                ttCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGa                                                   >  1:1843352/1‑53 (MQ=255)
                                ttCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGa                                                   >  1:2586177/1‑53 (MQ=255)
                                ttCGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCt                                 >  1:1422136/1‑71 (MQ=255)
                                  cGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCtt                                <  1:432670/70‑1 (MQ=255)
                                  cGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTg                               >  1:2162896/1‑71 (MQ=255)
                                  cGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTg                               >  1:1482605/1‑71 (MQ=255)
                                  cGTAGCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTg                               >  1:1336363/1‑71 (MQ=255)
                                      gCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCaa                                    >  1:2718220/1‑62 (MQ=255)
                                      gCGACCGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGt                            >  1:2997685/1‑70 (MQ=255)
                                          ccGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCtt                       <  1:801632/71‑2 (MQ=255)
                                          ccGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCtg                       <  1:2522311/71‑1 (MQ=255)
                                           cGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGAc                                                  >  1:853875/1‑43 (MQ=255)
                                           cGCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCtgt                      <  1:2222746/71‑1 (MQ=255)
                                            gCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCtgtg                     >  1:2456095/1‑71 (MQ=255)
                                            gCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCtgtg                     <  1:332502/71‑1 (MQ=255)
                                            gCACACCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCtgtg                     <  1:2497218/71‑1 (MQ=255)
                                             cacaCCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTgtgg                    >  1:1436376/1‑71 (MQ=255)
                                              acacCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGa                                        <  1:2558081/50‑1 (MQ=255)
                                              acacCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTgtggt                   <  1:44106/71‑1 (MQ=255)
                                               cacCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTcc                          >  1:383556/1‑63 (MQ=255)
                                                acCAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGa                 <  1:1009431/71‑1 (MQ=255)
                                                 ccAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGccc                                              >  1:2569635/1‑41 (MQ=255)
                                                  cAGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGa                                        >  1:998519/1‑46 (MQ=255)
                                                   aGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAg                                   <  1:2794579/50‑1 (MQ=255)
                                                   aGAATCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAg                                   <  1:1915162/50‑1 (MQ=255)
                                                     aaTCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTgtggt                   <  1:961827/64‑1 (MQ=255)
                                                      aTCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCtt                                >  1:2004345/1‑50 (MQ=255)
                                                       tCAATTTTTGATCCGTTGCCAGTTCGCTGACGCCCg                                             >  1:2481332/1‑36 (MQ=255)
                                                         aaTTTTTGATCCGTTGCCAGTTCGCTAACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATAAAt        >  1:1043371/1‑71 (MQ=255)
                                                           tttttGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATAAATCa      >  1:2419526/1‑71 (MQ=255)
                                                            ttttGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATa           >  1:950827/1‑65 (MQ=255)
                                                             tttGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATAAATCAcc    >  1:826222/1‑71 (MQ=255)
                                                               tGATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATa           >  1:999731/1‑62 (MQ=255)
                                                                gATCCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATAAATCACCtt  <  1:1951317/70‑1 (MQ=255)
                                                                   |                                                                  
ATTTCGGTTTGGATCACGCGCTCATCTATACCTTCGTAGCGACCGCACACCAGAATCAATTTTTGATTCGTTGCCAGTTCGCTGACGCCCGCTTGATCAAGCTTGCGTCCCTGTGGTGACAGATAAATCACCTT  >  minE/1777646‑1777779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: