Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | minE | 983,543:1 | +A | 100% | intergenic (+455/‑113) | ydfC → / → dicB | hypothetical protein/cell division inhibition protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | minE | 983,543 | 1 | . | A | 100.0% | 40.2 / NA | 13 | intergenic (+455/‑113) | ydfC/dicB | hypothetical protein/cell division inhibition protein |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (0/13); total (0/13) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
CTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑AAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTG > minE/983481‑983587 | cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGTAACAGTTAAAACC‑aaaa < 1:89729/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:305160/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:93096/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:890699/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:839342/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:782065/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:626054/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:602285/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:354590/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:1020905/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:2186778/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:1113284/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:1966601/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:1276348/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:1554719/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:137715/67‑1 (MQ=255) cTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:1984770/67‑1 (MQ=255) tttttAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:468021/66‑1 (MQ=255) tttttAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑aaaa < 1:721662/66‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:1486392/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:1243904/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:1348123/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:713154/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:711689/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:1383482/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:590510/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:432532/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:1587153/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:2307094/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:217657/67‑1 (MQ=255) cgcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:2070165/67‑1 (MQ=255) gcACGCGGAACAGTTAAAACCAAAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTg < 1:895908/66‑1 (MQ=255) | CTTTTTAAAGTGAATTTTGTGATGTGGTGAATGCGGCTGAGCGCACGCGGAACAGTTAAAACC‑AAAAACAGTGTTATGGGTGGATTCTCTGTATCCGGCGTTAATTG > minE/983481‑983587 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |