Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1046629	1046633	5	5 [0]	[0] 24	ydhH	conserved hypothetical protein

CGCGTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGT  >  minE/1046564‑1046628                                                                 | cgcgTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGt  >  1:1605242/1‑65 (MQ=255) cgcgTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGt  >  1:1608010/1‑65 (MQ=255) cgcgTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGt  >  1:2112862/1‑65 (MQ=255) cgcgTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGt  >  1:2210180/1‑65 (MQ=255) cgcgTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGt  >  1:791560/1‑65 (MQ=255)                                                                 | CGCGTCCGGTGCTTTTCGGTGCAGGTTGCGAGAAATACGGGTCGCTGAGCATATTTTGCAGCAGT  >  minE/1046564‑1046628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑