Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1122986	1123019	34	7 [0]	[0] 14	ihfA	integration host factor (IHF), DNA‑binding protein, alpha subunit

GAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAA  >  minE/1122919‑1122985                                                                   | gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:1227457/67‑1 (MQ=255) gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:2043269/67‑1 (MQ=255) gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:2155039/67‑1 (MQ=255) gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:2171563/67‑1 (MQ=255) gagCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:886945/67‑1 (MQ=255)  agCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:1289574/66‑1 (MQ=255)               gttagATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTaa  <  1:438347/53‑1 (MQ=255)                                                                   | GAGCGGCCTTTTTAGTTAGATCAGATTACTCGTCTTTGGGCGAAGCGTTTTCGACCCGGCTTTTTAA  >  minE/1122919‑1122985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑