Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1441339	1441340	2	20 [0]	[0] 4	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

TTGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTCTA  >  minE/1441272‑1441338                                                                   | ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1303538/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:957117/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:917155/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:859060/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:743637/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:71292/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:504413/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:453367/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:397157/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:2280649/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:2176878/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:2113602/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1869137/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1758474/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1604637/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1482259/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1445633/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1124204/67‑1 (MQ=255) ttGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGGTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:2277508/67‑1 (MQ=255)  tGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTcta  <  1:1314926/66‑1 (MQ=255)                                                                   | TTGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTCTA  >  minE/1441272‑1441338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑