Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1446695	1446781	87	47 [0]	[1] 39	rcsC	hybrid sensory kinase in two‑component regulatory system with RcsB and YojN

ATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATG  >  minE/1446628‑1446694                                                                   | aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCTAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:85809/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:70876/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:237913/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:298767/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:330889/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:347987/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:376864/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:430874/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:479574/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:504652/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:522618/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:601650/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:64302/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:2311466/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:713488/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:715749/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:804100/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:824800/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:858263/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:858791/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:903841/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:92545/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:952172/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:99844/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1851834/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1137863/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1200364/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1248431/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1350620/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1400362/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1408320/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:156226/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1577486/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:178882/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:187718/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1879491/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1890/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1933906/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:2000634/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:2017903/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:2076745/67‑1 (MQ=255) aTCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:2237952/67‑1 (MQ=255)  tCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1866867/66‑1 (MQ=255)  tCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1541131/66‑1 (MQ=255)  tCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1903604/66‑1 (MQ=255)  tCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATg  <  1:1279708/66‑1 (MQ=255)        ttAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGTTATGACCATTTTCATCAAGAATg  <  1:1089478/60‑1 (MQ=255)                                                                   | ATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATG  >  minE/1446628‑1446694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑