Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	49396	49432	37	40 [1]	[1] 11	ksgA	S‑adenosylmethionine‑6‑N',N'‑adenosyl (rRNA) dimethyltransferase

CATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGTTAACACCTCGACGC  >  minE/49329‑49408                                                                   |              cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:499014/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2081629/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1011568/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2142524/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2145179/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2178561/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2311316/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:319327/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:393682/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:416559/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2140379/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:534865/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:548951/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:559114/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:652727/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:695440/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:725701/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:84718/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:951715/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1519784/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1071206/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1159371/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1160388/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1192698/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1227874/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1262860/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1341175/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2045845/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1590238/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1656532/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1674326/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1758872/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1944792/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1970932/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1998661/67‑1 (MQ=255) cATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:2020413/67‑1 (MQ=255)  aTCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:937311/66‑1 (MQ=255)            atTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:1403741/56‑1 (MQ=255)               gcgcGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGtt               <  1:929595/53‑1 (MQ=255)               gcgcGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGTTAACACCTCGACGc  >  1:34852/1‑66 (MQ=255)                                                                   |              CATCTGGCAATATTGCGCGACAGAGATATTTTCCGCTCGCATCGCCGGGTCGATCCCCATTCCCGTTAACACCTCGACGC  >  minE/49329‑49408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑