Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1723269	1723271	3	40 [0]	[0] 25	yfhK	predicted sensory kinase in two‑component system

GCGTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTG  >  minE/1723202‑1723268                                                                   | gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGTTTGCCAACCAAAATATTg  >  1:2075610/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:399347/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1031751/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:2032451/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:2051347/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:2100135/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:2153655/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:2658/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:271875/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:317166/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:2004325/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:547839/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:565855/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:654035/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:769232/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:797700/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:901959/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:933658/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:952231/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:992186/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1518300/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1129715/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:114863/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1163357/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1199784/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1208444/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1237384/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1299273/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:130247/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:136500/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1930062/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1553091/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1655314/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1736036/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:175147/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1799307/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1813425/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1887931/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTg  >  1:1916250/1‑67 (MQ=255) gcgTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGACAACCAAAATATTg  >  1:2204281/1‑67 (MQ=255)                                                                   | GCGTGAAAAGCAGTACCATTACCAGACTCACCAGAAATAGCACCAGCGATTGCCAACCAAAATATTG  >  minE/1723202‑1723268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑