Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2496080	2496094	15	52 [0]	[0] 26	emrD	multidrug efflux system protein

GCGCTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATAAAAA  >  minE/2496013‑2496079                                                                   | gcgcTGGCGGCAATCAACGCCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:863937/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:229145/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1905854/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1968195/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2001195/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2071467/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2089541/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2092551/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2149931/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2210508/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2277553/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:10552/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:254406/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:266049/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:275766/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:640714/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:706877/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:848143/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:888403/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:898132/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1581588/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1601853/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1115780/67‑1 (MQ=255) gcgcTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1227080/67‑1 (MQ=255)   tcTGGCGGCAATCAACACCGTCAAACTGGAGGGCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1054538/64‑1 (MQ=255)    cTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1728841/64‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:799456/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1308091/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1102540/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:981030/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:302519/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1330377/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1330616/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1428980/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2308334/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2307415/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1499470/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1492754/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2254399/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:151981/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:220608/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2198232/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1571931/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:2068150/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1613789/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1636803/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1707827/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1869945/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1799991/59‑1 (MQ=255)         ggcAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1747883/59‑1 (MQ=255)                            cTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1276754/40‑1 (MQ=255)                                 ggTCGTGACCGCGACCAGCGTTGCCAGCATaaaaa  <  1:1573289/35‑1 (MQ=255)                                                                   | GCGCTGGCGGCAATCAACACCGTCAAACTGGAGGTCGTGACCGCGACCAGCGTTGCCAGCATAAAAA  >  minE/2496013‑2496079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑