Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1026393	1026402	10	11 [0]	[0] 35	malI	DNA‑binding transcriptional repressor

CAAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTC  >  minE/1026403‑1026469 |                                                                   caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGt          >  1:1762327/1‑59 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGt   >  1:1022589/1‑66 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGt   >  1:958557/1‑66 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2157468/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1001602/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:925823/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:911039/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:889282/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:856749/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:796070/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:774506/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:744498/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:639694/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:628712/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:533865/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:367520/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:303978/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2290348/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2195379/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1047942/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2136294/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2118075/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2114144/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2095700/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2056577/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:2020736/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1852076/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1820895/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1024011/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1603097/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1542441/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1450364/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1187400/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1162142/1‑67 (MQ=255) caAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTc  >  1:1120062/1‑67 (MQ=255) |                                                                   CAAGATAACTGGCACGGGAAGCGAAAATCACCGGGATAGCTTTTTCTTCTGCCATCCGTCGCAGGTC  >  minE/1026403‑1026469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑