Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1039754	1039773	20	23 [0]	[0] 34	nth	DNA glycosylase and apyrimidinic (AP) lyase

CATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTT  >  minE/1039774‑1039840 |                                                                   cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:379113/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1986446/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:2022284/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:2022594/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:2178086/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:2224923/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:2314699/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:344086/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:356078/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1924854/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:578256/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:637784/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:657730/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:716633/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:813885/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:848049/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:906664/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1697792/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1104965/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1134184/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1381718/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1460256/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1549032/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1577290/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1627143/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1692518/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1050536/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:172588/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1749353/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:177948/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1796109/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1858143/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1901949/1‑67 (MQ=255) cATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGtt  >  1:1911036/1‑67 (MQ=255) |                                                                   CATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTT  >  minE/1039774‑1039840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑