Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1318395	1318406	12	66 [0]	[0] 46	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

GACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGAAA  >  minE/1318407‑1318473 |                                                                   gACGTCCATTTCTCCTTCGCTACTGGCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1155785/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:644490/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1957480/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1985313/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:2015984/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:2167676/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:2257332/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:268427/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:323009/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:385893/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:493449/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:575365/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:638793/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1951138/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:646345/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:690772/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:690823/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:757018/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:759752/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:798821/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:887606/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:889139/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:920954/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:985512/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1573986/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1053593/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:105487/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1086819/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1212509/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1358039/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1433250/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1439944/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1497822/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1547738/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1025389/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1668124/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1679780/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1713395/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1807280/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1845080/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1853922/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1858188/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1879066/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1891639/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1928271/67‑1 (MQ=255) gACGTCCATTTCTCCTTCGATACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGaaa  <  1:1349921/67‑1 (MQ=255) |                                                                   GACGTCCATTTCTCCTTCGCTACTGCCAAATATCCAATAGCCAGGGCAATAGCCACAATGACGGAAA  >  minE/1318407‑1318473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑