Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1635942	1635963	22	53 [0]	[0] 26	acrD	aminoglycoside/multidrug efflux system

TGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTCC  >  minE/1635964‑1636030 |                                                                   tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2056484/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:954271/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:744242/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:727677/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:350576/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2306195/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2269499/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2217418/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2200799/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2194709/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:215864/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:2151616/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1037060/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1954431/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1834003/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1821480/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1682968/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1673729/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1610539/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:155426/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1378378/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1227437/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1182149/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:1145023/67‑1 (MQ=255) tGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGAGCGCCATAACGGCCTCGACGACAGTcc  <  1:181914/67‑1 (MQ=255) tGCTGGCGCTCGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTcc  <  1:210332/67‑1 (MQ=255) |                                                                   TGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTCC  >  minE/1635964‑1636030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑