Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1772628	1772635	8	2 [0]	[0] 39	tyrA	fused chorismate mutase T and prephenate dehydrogenase

AAAGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGC  >  minE/1772636‑1772702 |                                                                   aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcggc  >  1:420355/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1947612/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1876728/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:2010461/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:2038514/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:2051600/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:2211846/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:2268072/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:232147/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:26762/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:370744/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:423773/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:472060/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:47586/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:650907/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:686491/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:85148/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:900035/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:982811/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1349183/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1081599/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1130691/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1218241/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1229889/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1321108/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:132757/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1072163/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:135512/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1364791/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1379952/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1411372/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1525722/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1546394/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:161308/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1670525/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1836270/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTAagcagc  >  1:886682/1‑67 (MQ=255) aaaGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCCAATAAATTCagcagc  >  1:1157163/1‑67 (MQ=255) aaaGCGGCTTTTCACATCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCagcagc  >  1:1178653/1‑67 (MQ=255) |                                                                   AAAGCGGCTTTTCACCTCGCCCACTTCAGCAACCAGTTCCAGACGCTTCGCTAATAAATTCAGCAGC  >  minE/1772636‑1772702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑