Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1836311	1836320	10	20 [0]	[0] 28	rpoS	RNA polymerase, sigma S (sigma 38) factor

CGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATC  >  minE/1836321‑1836387 |                                                                   cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCtt                       >  1:337112/1‑46 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAAt   >  1:957952/1‑66 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1997005/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:998983/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:911634/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:777691/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:576717/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:50904/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:47478/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:471160/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:42524/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:380560/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:248661/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:227294/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1055048/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1776948/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1734406/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:173213/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1722837/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:161201/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1466742/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1427371/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1342756/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1248626/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1245769/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1225365/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATc  >  1:1149655/1‑67 (MQ=255) cGGGTGAGGCCAATTTCACGACCTACAACTTCCAGTGTTGCCGCTTCGTa                   >  1:1732952/1‑50 (MQ=255) |                                                                   CGGGTGAGGCCAATTTCACGACCTACATCTTCCAGTGTTGCCGCTTCGTACCCCAGCAAACCGAATC  >  minE/1836321‑1836387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑