Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2259064	2259103	40	35 [0]	[0] 26	rpoB	RNA polymerase, beta subunit

AATGCACGGTTGGCGTCATCGTGTTCCAGGAACGGGATCAGGGACGCA  >  minE/2259104‑2259151 |                                                aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1868559/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:589711/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:569313/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:566578/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:511828/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:482190/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:396999/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:388159/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:2286167/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:2236693/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:2147419/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1072685/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1731245/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1698554/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1686785/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1545081/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1473200/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:865353/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1344617/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1326270/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:1226489/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACggg              <  1:121983/36‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACGGGATCAGGGACGCa  <  1:1924224/48‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACGGGATCAGGGACGCa  <  1:933394/48‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACGGGATCAGGGACGCa  <  1:1407552/48‑1 (MQ=255) aaTGCACGGTTGGCGTCATCGTGTTCCAGGAACGGGATCAGGGACGCa  <  1:1205900/48‑1 (MQ=255) |                                                AATGCACGGTTGGCGTCATCGTGTTCCAGGAACGGGATCAGGGACGCA  >  minE/2259104‑2259151

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑