Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2440969	2441018	50	9 [0]	[0] 58	ilvY	DNA‑binding transcriptional dual regulator

AGCAGTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTC  >  minE/2441019‑2441085 |                                                                   agcagTTGCGCCACACCATCGATCAGCAAGGGCGGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1469108/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGctctct                         >  1:129494/1‑44 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCt   >  1:1454418/1‑66 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:34871/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:489521/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:486491/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:455558/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:426065/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:411125/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2244935/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:30571/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:242226/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2308187/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2295600/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2286486/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2257748/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2156333/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:532449/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:538348/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:549732/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:589813/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:675856/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:679992/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:736017/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:738809/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:823031/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:860396/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:9294/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:941008/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:966851/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1476780/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1048036/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1055516/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1090637/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1105557/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1141085/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1190613/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1205834/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1266965/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1269451/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:132317/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1389526/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1411407/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1429612/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2180200/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1581342/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1612928/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1624292/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1763351/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1774884/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1797666/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1801637/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1872748/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1952932/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2073914/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:2117736/1‑67 (MQ=255) agcagTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:1045036/1‑67 (MQ=255) agcaaTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTc  >  1:355297/1‑67 (MQ=255) |                                                                   AGCAGTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTC  >  minE/2441019‑2441085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑