Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 46,543 Δ1 bp 100% coding (1097/1863 nt) kefC → potassium:proton antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE46,5430T.100.0% 48.7 / NA 12coding (1097/1863 nt)kefCpotassium:proton antiporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (12/0);  total (12/0)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

GGCGAAATCGCTGACCCTGGCGGTGGCGCTGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCA  >  minE/46514‑46581
                             |                                      
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCTACGCCGATTCTGCTGGTGATc      >  1:1662198/1‑63 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTc   >  1:145877/1‑66 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTc   >  1:619951/1‑66 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:1557301/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:1638584/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:170922/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:1777951/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:185355/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:2088993/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:411258/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:612756/1‑67 (MQ=255)
ggCGAAATCGCTGACCCTGGCGGTGGCGCGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCa  >  1:863512/1‑67 (MQ=255)
                             |                                      
GGCGAAATCGCTGACCCTGGCGGTGGCGCTGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCA  >  minE/46514‑46581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: