Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	541010	541017	8	8 [0]	[0] 9	[rhtA]	[rhtA]

TAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCA  >  minE/540945‑541009                                                                 | tataCGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:1248525/62‑1 (MQ=255) tAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:2122956/65‑1 (MQ=255) tAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:221201/65‑1 (MQ=255) tAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:775038/65‑1 (MQ=255) tAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:924484/65‑1 (MQ=255)  aGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:268917/64‑1 (MQ=255)  aGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:942431/64‑1 (MQ=255)         aTGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCa  <  1:1482964/57‑1 (MQ=255)                                                                 | TAGACGCCATGGCAACGAGCAATATGACTATTGGTAACCAGACCGGCATTTTACGTAATGAACCA  >  minE/540945‑541009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑