Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 945149 945153 5 80 [0] [0] 16 ddpB D‑Ala‑D‑Ala transporter subunit

CACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAT  >  minE/945082‑945148
                                                                  |
cactTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1124091/67‑1 (MQ=255)
cacaTAGGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:615653/67‑1 (MQ=255)
cacaTACGCAAATGAACCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:724531/67‑1 (MQ=255)
cacaTAAGCAAATGAACCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:788077/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:246288/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:3838/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:226535/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:2135285/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1912826/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1907993/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1906692/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:187010/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1002611/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1809972/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1786945/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1746204/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1699732/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:304226/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:35819/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1851318/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:462401/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:479202/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:634354/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:645241/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:717292/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:801852/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:848449/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:950950/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:972106/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:979219/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1355919/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1005380/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:105027/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1136783/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1171205/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:119966/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1429523/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1470935/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1505302/67‑1 (MQ=255)
cacaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1596407/67‑1 (MQ=255)
cacaAAACCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:493195/67‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1556600/66‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1021954/66‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1647286/66‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:2107541/66‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1432693/66‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:239819/66‑1 (MQ=255)
 acaTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1303353/66‑1 (MQ=255)
 acaTAACCAAATGAACCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:2108318/66‑1 (MQ=255)
  caaaaGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1496577/62‑1 (MQ=255)
  caTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1931141/65‑1 (MQ=255)
  caTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1209386/65‑1 (MQ=255)
   aTAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:446085/64‑1 (MQ=255)
    tAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1687387/63‑1 (MQ=255)
    tAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:538406/63‑1 (MQ=255)
    tAAGAAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1308345/63‑1 (MQ=255)
      aGCAAATCAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1756741/61‑1 (MQ=255)
       gCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1210625/60‑1 (MQ=255)
        cAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1042576/59‑1 (MQ=255)
        cAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1813811/59‑1 (MQ=255)
        cAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:703849/59‑1 (MQ=255)
        cAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1217997/59‑1 (MQ=255)
        cAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1678528/59‑1 (MQ=255)
            taaaaCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:246040/53‑1 (MQ=255)
            tGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1602353/55‑1 (MQ=255)
            tGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:2034084/55‑1 (MQ=255)
            tGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1624599/55‑1 (MQ=255)
               aaCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1848877/52‑1 (MQ=255)
                aCCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1144950/51‑1 (MQ=255)
                 ccACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1189125/50‑1 (MQ=255)
                 ccACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:802801/50‑1 (MQ=255)
                 ccACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1705877/50‑1 (MQ=255)
                 ccACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1182106/50‑1 (MQ=255)
                 ccACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1547029/50‑1 (MQ=255)
                 ccACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:351943/50‑1 (MQ=255)
                 ccACGACGGCAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:1608299/49‑1 (MQ=255)
                  cACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:324623/49‑1 (MQ=255)
                    cgacgGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:26414/47‑1 (MQ=255)
                    cgacgGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:55795/47‑1 (MQ=255)
                     tacgGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAt  <  1:560572/45‑1 (MQ=255)
                                                                  |
CACATAAGCAAATGAAACCACGACGGCAAAGCCCATCACTGCCGGGAAGTCGAGCGCCTGTATTGAT  >  minE/945082‑945148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: