Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1176932	1176949	18	41 [1]	[0] 12	sppA	protease IV

ACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAA  >  minE/1176867‑1176934                                                                 |    aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGCCCAACCGTCTATGCAGTACATCgg     >  1:926447/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACTAACCGTCTATGCAGTACATCgg     >  1:988352/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1057528/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:24104/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:299324/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:316624/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:349639/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:39899/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:419857/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:435377/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:626354/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:639384/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:688744/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:694538/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:729479/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:790008/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:84538/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:877216/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:911928/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:96173/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:178858/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:109975/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1105749/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1445754/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:147038/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:149890/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1625931/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1658835/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1753677/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1780791/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:2142848/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1915821/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1929566/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1957124/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1994292/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:1995684/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:205570/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCgg     >  1:2090183/1‑65 (MQ=255) aCCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGCCTATGCAGTACATCgg     >  1:2112334/1‑65 (MQ=255) aCCGGTATTGTGATGGAACTGAAAAACTACGCAGGCGGCGACCAACCGACTATGCAGTACATCgg     >  1:403293/1‑65 (MQ=255) aCCGGTATTGT‑ATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCaa  >  1:818135/1‑67 (MQ=255)                                                                 |    ACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAA  >  minE/1176867‑1176934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑